Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 AL512652.2-201ENST00000625156 1716 ntBASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 AC005034.1-201ENST00000426657 489 ntBASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 AL353705.2-201ENST00000428243 662 ntBASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 AC004890.2-204ENST00000481968 304 ntBASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 AC007967.4-201ENST00000614700 386 ntBASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 SPTSSB-204ENST00000617024 1292 ntBASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 SPDYE12P-201ENST00000618416 771 ntBASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 AC073439.1-201ENST00000624121 1774 ntBASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 AC006449.5-201ENST00000610658 2098 ntBASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
NPIPA1Q9UND3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 AL031731.1-201ENST00000642131 2094 ntBASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 AC067930.6-201ENST00000623257 4947 ntBASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 MTND6P24-201ENST00000440466 518 ntBASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 AL138828.2-201ENST00000615812 383 ntBASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 AL035252.4-201ENST00000624174 288 ntBASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 FOXO1B-201ENST00000504678 1527 ntBASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 ME2P1-201ENST00000426028 1970 ntBASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
NPIPA1Q9UND3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NPIPA1Q9UND3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms