Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 OR8S1-201ENST00000310194 1080 ntBASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 KRT18P64-201ENST00000434946 1219 ntBASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 RN7SL837P-201ENST00000463010 287 ntBASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 KRT18P43-201ENST00000469825 1281 ntBASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SYNPO2Q9UMS6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SYNPO2Q9UMS6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SYNPO2Q9UMS6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SYNPO2Q9UMS6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 AC007389.4-201ENST00000454674 793 ntBASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 AL033527.5-201ENST00000641382 801 ntBASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SYNPO2Q9UMS6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 AL133267.1-201ENST00000398220 340 ntBASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 AC015936.2-201ENST00000593177 259 ntBASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SYNPO2Q9UMS6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SYNPO2Q9UMS6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms