Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GCM1Q9NP62 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 TSEN15P1-201ENST00000423257 515 ntBASIC13.85□□□□□ -0.19
GCM1Q9NP62 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 AC098859.1-201ENST00000502915 1238 ntBASIC13.85□□□□□ -0.19
GCM1Q9NP62 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.85□□□□□ -0.19
GCM1Q9NP62 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
GCM1Q9NP62 U82695.1-201ENST00000635752 1889 ntBASIC13.84□□□□□ -0.19
GCM1Q9NP62 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 RBPMS2P1-201ENST00000437762 623 ntBASIC13.84□□□□□ -0.19
GCM1Q9NP62 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 HLA-J-203ENST00000494367 1087 ntBASIC13.84□□□□□ -0.19
GCM1Q9NP62 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
GCM1Q9NP62 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GCM1Q9NP62 KRT18P28-201ENST00000453838 1332 ntBASIC13.84□□□□□ -0.19
GCM1Q9NP62 AL589702.1-201ENST00000641229 1509 ntBASIC13.84□□□□□ -0.19
GCM1Q9NP62 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms