Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
BRF2Q9HAW0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 AL691432.1-201ENST00000596308 1422 ntBASIC15.44■□□□□ 0.06
BRF2Q9HAW0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 HLA-H-201ENST00000383620 1096 ntBASIC15.44■□□□□ 0.06
BRF2Q9HAW0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 POLD2P1-201ENST00000511220 997 ntBASIC15.44■□□□□ 0.06
BRF2Q9HAW0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 KRT8P48-201ENST00000515599 1220 ntBASIC15.44■□□□□ 0.06
BRF2Q9HAW0 RNA5SP410-201ENST00000516285 106 ntBASIC15.44■□□□□ 0.06
BRF2Q9HAW0 IGHV3-62-201ENST00000520057 340 ntBASIC15.44■□□□□ 0.06
BRF2Q9HAW0 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 AC084121.4-201ENST00000641598 221 ntBASIC15.44■□□□□ 0.06
BRF2Q9HAW0 AF228730.8-201ENST00000642140 221 ntBASIC15.44■□□□□ 0.06
BRF2Q9HAW0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.44■□□□□ 0.06
BRF2Q9HAW0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
BRF2Q9HAW0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.43■□□□□ 0.06
BRF2Q9HAW0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
BRF2Q9HAW0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms