Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.33□□□□□ -0.11
COMMD4Q9H0A8 AP002414.2-201ENST00000591780 3365 ntBASIC14.33□□□□□ -0.11
COMMD4Q9H0A8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
COMMD4Q9H0A8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 AC091304.2-201ENST00000564639 760 ntBASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 AC013268.4-201ENST00000637413 2228 ntBASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COMMD4Q9H0A8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 AC021087.4-201ENST00000563761 564 ntBASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 PRELID1P1-202ENST00000567272 903 ntBASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 AC008667.4-201ENST00000607370 168 ntBASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 REXO1L6P-202ENST00000619970 1078 ntBASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COMMD4Q9H0A8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
COMMD4Q9H0A8 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms