Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FOXP3Q9BZS1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 PPT1-215ENST00000641471 2368 ntBASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 AC012569.1-201ENST00000591191 1524 ntBASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 IGLL3P-201ENST00000412472 434 ntBASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 YBX1P5-201ENST00000509441 847 ntBASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 C20orf181-201ENST00000623918 480 ntBASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 AC023157.3-201ENST00000619086 2088 ntBASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.72■□□□□ 0.27
FOXP3Q9BZS1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 MRPL20P1-201ENST00000400819 433 ntBASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 MIR3909-201ENST00000579518 119 ntBASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.71■□□□□ 0.27
FOXP3Q9BZS1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
FOXP3Q9BZS1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
FOXP3Q9BZS1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms