Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 EMBP1-201ENST00000458200 901 ntBASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HDHD3Q9BSH5 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 HAUS4P1-201ENST00000406739 1145 ntBASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 AC093724.1-201ENST00000448659 1027 ntBASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 AC092910.1-201ENST00000482027 1129 ntBASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 AC020658.6-201ENST00000623564 1870 ntBASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 AC067930.6-201ENST00000623257 4947 ntBASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.67□□□□□ -0.22
HDHD3Q9BSH5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.66□□□□□ -0.22
HDHD3Q9BSH5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms