Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.6■□□□□ 0.25
CDCA3Q99618 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.6■□□□□ 0.25
CDCA3Q99618 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDCA3Q99618 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.59■□□□□ 0.25
CDCA3Q99618 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.59■□□□□ 0.25
CDCA3Q99618 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.59■□□□□ 0.25
CDCA3Q99618 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.59■□□□□ 0.25
CDCA3Q99618 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.59■□□□□ 0.25
CDCA3Q99618 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.59■□□□□ 0.25
CDCA3Q99618 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 HNRNPUP1-201ENST00000554987 333 ntBASIC16.59■□□□□ 0.25
CDCA3Q99618 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.59■□□□□ 0.25
CDCA3Q99618 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.59■□□□□ 0.25
CDCA3Q99618 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.59■□□□□ 0.25
CDCA3Q99618 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.59■□□□□ 0.25
CDCA3Q99618 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.59■□□□□ 0.25
CDCA3Q99618 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.59■□□□□ 0.25
CDCA3Q99618 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDCA3Q99618 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.59■□□□□ 0.25
CDCA3Q99618 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.59■□□□□ 0.25
CDCA3Q99618 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.59■□□□□ 0.25
CDCA3Q99618 AL121723.1-201ENST00000445194 1519 ntBASIC16.59■□□□□ 0.25
CDCA3Q99618 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.59■□□□□ 0.25
CDCA3Q99618 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.59■□□□□ 0.25
CDCA3Q99618 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.59■□□□□ 0.25
CDCA3Q99618 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.59■□□□□ 0.25
CDCA3Q99618 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.59■□□□□ 0.25
CDCA3Q99618 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA3Q99618 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.58■□□□□ 0.25
CDCA3Q99618 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.58■□□□□ 0.25
CDCA3Q99618 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CDCA3Q99618 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.58■□□□□ 0.25
CDCA3Q99618 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDCA3Q99618 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDCA3Q99618 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.58■□□□□ 0.24
CDCA3Q99618 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.58■□□□□ 0.24
CDCA3Q99618 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CDCA3Q99618 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA3Q99618 SLC25A24P2-201ENST00000415059 510 ntBASIC16.58■□□□□ 0.24
CDCA3Q99618 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA3Q99618 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA3Q99618 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 RHOQP1-201ENST00000555758 579 ntBASIC16.58■□□□□ 0.24
CDCA3Q99618 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA3Q99618 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.58■□□□□ 0.24
CDCA3Q99618 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.58■□□□□ 0.24
CDCA3Q99618 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.58■□□□□ 0.24
CDCA3Q99618 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CDCA3Q99618 AC244452.3-201ENST00000636814 210 ntBASIC16.58■□□□□ 0.24
CDCA3Q99618 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDCA3Q99618 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 AL607033.1-201ENST00000623900 1599 ntBASIC16.58■□□□□ 0.24
CDCA3Q99618 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA3Q99618 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.58■□□□□ 0.24
CDCA3Q99618 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA3Q99618 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDCA3Q99618 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA3Q99618 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA3Q99618 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CDCA3Q99618 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDCA3Q99618 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.57■□□□□ 0.24
CDCA3Q99618 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.57■□□□□ 0.24
CDCA3Q99618 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.57■□□□□ 0.24
CDCA3Q99618 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.57■□□□□ 0.24
CDCA3Q99618 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDCA3Q99618 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.57■□□□□ 0.24
CDCA3Q99618 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms