Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 RNA5SP410-201ENST00000516285 106 ntBASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 AC011477.6-201ENST00000604980 1927 ntBASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MS4A4EQ96PG1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.08■□□□□ 0.01
MS4A4EQ96PG1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.08■□□□□ 0.01
MS4A4EQ96PG1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MS4A4EQ96PG1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
MS4A4EQ96PG1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.08■□□□□ 0.01
MS4A4EQ96PG1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
MS4A4EQ96PG1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MS4A4EQ96PG1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MS4A4EQ96PG1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
MS4A4EQ96PG1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
MS4A4EQ96PG1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 MIR346-201ENST00000362234 95 ntBASIC15.08■□□□□ 0
MS4A4EQ96PG1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 AC005829.1-201ENST00000570002 483 ntBASIC15.08■□□□□ 0
MS4A4EQ96PG1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
MS4A4EQ96PG1 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.08■□□□□ 0
MS4A4EQ96PG1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 AL592309.1-201ENST00000443127 649 ntBASIC15.07■□□□□ 0
MS4A4EQ96PG1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 CEND1P1-201ENST00000451006 455 ntBASIC15.07■□□□□ 0
MS4A4EQ96PG1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 AC069335.1-201ENST00000489972 472 ntBASIC15.07■□□□□ 0
MS4A4EQ96PG1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 LINC01225-203ENST00000563550 1244 ntBASIC15.07■□□□□ 0
MS4A4EQ96PG1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 PAUPAR-201ENST00000630360 2965 ntBASIC15.07■□□□□ 0
MS4A4EQ96PG1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MS4A4EQ96PG1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.07■□□□□ 0
MS4A4EQ96PG1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms