Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC17Q96LX7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
CCDC17Q96LX7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 TOMM22P5-201ENST00000416399 439 ntBASIC18.7■□□□□ 0.58
CCDC17Q96LX7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 RN7SL752P-201ENST00000463779 287 ntBASIC18.7■□□□□ 0.58
CCDC17Q96LX7 ELK1P1-201ENST00000485699 580 ntBASIC18.7■□□□□ 0.58
CCDC17Q96LX7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.7■□□□□ 0.58
CCDC17Q96LX7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 AC104596.2-201ENST00000512793 793 ntBASIC18.69■□□□□ 0.58
CCDC17Q96LX7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC17Q96LX7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC17Q96LX7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms