Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TRIM43Q96BQ3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 GGT3P-204ENST00000453783 1664 ntBASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 AC026410.3-201ENST00000514280 936 ntBASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 CHMP4BP1-201ENST00000556017 588 ntBASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 AC020914.3-201ENST00000594712 304 ntBASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 PP12613-201ENST00000424958 2230 ntBASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRIM43Q96BQ3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 MTX1P1-201ENST00000440904 838 ntBASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 HOMER2P2-201ENST00000451621 847 ntBASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 AC000095.1-201ENST00000603208 874 ntBASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 U62317.3-201ENST00000608319 855 ntBASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 DRD5P1-201ENST00000456605 1438 ntBASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms