Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BRF1Q92994 AC092865.5-201ENST00000545435 363 ntBASIC19.02■□□□□ 0.64
BRF1Q92994 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.02■□□□□ 0.64
BRF1Q92994 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.02■□□□□ 0.64
BRF1Q92994 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF1Q92994 MIR3687-2-201ENST00000577708 61 ntBASIC19.02■□□□□ 0.64
BRF1Q92994 AC024267.1-201ENST00000582320 895 ntBASIC19.02■□□□□ 0.64
BRF1Q92994 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.02■□□□□ 0.64
BRF1Q92994 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.02■□□□□ 0.64
BRF1Q92994 MIR3687-1-201ENST00000614492 61 ntBASIC19.02■□□□□ 0.64
BRF1Q92994 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF1Q92994 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF1Q92994 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
BRF1Q92994 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
BRF1Q92994 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
BRF1Q92994 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
BRF1Q92994 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
BRF1Q92994 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
BRF1Q92994 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF1Q92994 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
BRF1Q92994 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
BRF1Q92994 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.01■□□□□ 0.63
BRF1Q92994 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
BRF1Q92994 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.01■□□□□ 0.63
BRF1Q92994 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.01■□□□□ 0.63
BRF1Q92994 AC093520.2-201ENST00000561830 333 ntBASIC19.01■□□□□ 0.63
BRF1Q92994 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.01■□□□□ 0.63
BRF1Q92994 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.01■□□□□ 0.63
BRF1Q92994 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.01■□□□□ 0.63
BRF1Q92994 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.01■□□□□ 0.63
BRF1Q92994 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
BRF1Q92994 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRF1Q92994 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF1Q92994 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
BRF1Q92994 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRF1Q92994 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BRF1Q92994 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19■□□□□ 0.63
BRF1Q92994 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF1Q92994 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF1Q92994 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BRF1Q92994 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
BRF1Q92994 FAM58DP-201ENST00000428076 619 ntBASIC19■□□□□ 0.63
BRF1Q92994 AC005237.2-201ENST00000434368 219 ntBASIC19■□□□□ 0.63
BRF1Q92994 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
BRF1Q92994 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19■□□□□ 0.63
BRF1Q92994 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF1Q92994 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19■□□□□ 0.63
BRF1Q92994 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19■□□□□ 0.63
BRF1Q92994 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19■□□□□ 0.63
BRF1Q92994 AP3S2-216ENST00000617003 1561 ntBASIC19■□□□□ 0.63
BRF1Q92994 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19■□□□□ 0.63
BRF1Q92994 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BRF1Q92994 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
BRF1Q92994 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19■□□□□ 0.63
BRF1Q92994 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
BRF1Q92994 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BRF1Q92994 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19■□□□□ 0.63
BRF1Q92994 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
BRF1Q92994 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRF1Q92994 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
BRF1Q92994 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BRF1Q92994 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19■□□□□ 0.63
BRF1Q92994 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRF1Q92994 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19■□□□□ 0.63
BRF1Q92994 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BRF1Q92994 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.99■□□□□ 0.63
BRF1Q92994 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.99■□□□□ 0.63
BRF1Q92994 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
BRF1Q92994 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.99■□□□□ 0.63
BRF1Q92994 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRF1Q92994 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.99■□□□□ 0.63
BRF1Q92994 HLA-H-201ENST00000383620 1096 ntBASIC18.99■□□□□ 0.63
BRF1Q92994 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.99■□□□□ 0.63
BRF1Q92994 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.99■□□□□ 0.63
BRF1Q92994 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.99■□□□□ 0.63
BRF1Q92994 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.99■□□□□ 0.63
BRF1Q92994 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms