Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 AL805961.1-201ENST00000642026 753 ntBASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 AC022748.3-201ENST00000621828 275 ntBASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 ACKR1-201ENST00000368121 1240 ntBASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 AZGP1P1-201ENST00000411909 902 ntBASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 AC007274.2-201ENST00000421675 662 ntBASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 AC067852.2-201ENST00000590513 2313 ntBASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 GPAA1P2-202ENST00000606848 1787 ntBASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 AL118516.1-201ENST00000564152 670 ntBASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRUNE2Q8WUY3 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 NEFHP1-201ENST00000412845 2629 ntBASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 AC013467.2-201ENST00000605472 835 ntBASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 AC092171.3-201ENST00000610122 2651 ntBASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 AC106794.1-201ENST00000506935 792 ntBASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRUNE2Q8WUY3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.48■□□□□ 0.23
PRUNE2Q8WUY3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms