Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC12Q8WUD4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC12Q8WUD4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC12Q8WUD4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 AC007950.2-201ENST00000615045 2347 ntBASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 AC004449.1-201ENST00000564240 433 ntBASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 MIR6080-201ENST00000617359 66 ntBASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC12Q8WUD4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 CNN2P2-201ENST00000443536 909 ntBASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 CNN2P3-201ENST00000450201 906 ntBASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 AC069262.1-201ENST00000539058 672 ntBASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 AL136317.3-201ENST00000618497 906 ntBASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 KRT18P28-201ENST00000453838 1332 ntBASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC12Q8WUD4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 AL139400.1-201ENST00000366220 510 ntBASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.65■□□□□ 0.58
CCDC12Q8WUD4 HAUS4P1-201ENST00000406739 1145 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms