Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TMEM35BQ8NCS4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 AL627223.1-201ENST00000416693 442 ntBASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 KRT18P32-201ENST00000424695 1287 ntBASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 AC004835.2-201ENST00000603762 682 ntBASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 AP005117.1-202ENST00000581724 1908 ntBASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 AC011477.6-201ENST00000604980 1927 ntBASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM35BQ8NCS4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 AC243562.2-201ENST00000561247 970 ntBASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 RARRES2P9-201ENST00000565168 469 ntBASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 AL139384.1-201ENST00000612143 3047 ntBASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM35BQ8NCS4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM35BQ8NCS4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM35BQ8NCS4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEM35BQ8NCS4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM35BQ8NCS4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TMEM35BQ8NCS4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM35BQ8NCS4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
TMEM35BQ8NCS4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.09■□□□□ 0.33
TMEM35BQ8NCS4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEM35BQ8NCS4 FAM58DP-201ENST00000428076 619 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms