Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
SIX5Q8N196 KRT8P22-201ENST00000562317 1415 ntBASIC16.53■□□□□ 0.24
SIX5Q8N196 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.53■□□□□ 0.24
SIX5Q8N196 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SIX5Q8N196 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.52■□□□□ 0.24
SIX5Q8N196 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.52■□□□□ 0.24
SIX5Q8N196 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SIX5Q8N196 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.52■□□□□ 0.24
SIX5Q8N196 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
SIX5Q8N196 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.52■□□□□ 0.24
SIX5Q8N196 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SIX5Q8N196 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.52■□□□□ 0.24
SIX5Q8N196 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SIX5Q8N196 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SIX5Q8N196 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.52■□□□□ 0.24
SIX5Q8N196 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.52■□□□□ 0.24
SIX5Q8N196 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.52■□□□□ 0.24
SIX5Q8N196 AC025048.3-201ENST00000590609 569 ntBASIC16.52■□□□□ 0.24
SIX5Q8N196 AC005702.4-201ENST00000618393 416 ntBASIC16.52■□□□□ 0.24
SIX5Q8N196 CU634019.7-201ENST00000624153 1185 ntBASIC16.52■□□□□ 0.24
SIX5Q8N196 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.52■□□□□ 0.24
SIX5Q8N196 FP236241.2-201ENST00000624906 1185 ntBASIC16.52■□□□□ 0.24
SIX5Q8N196 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.52■□□□□ 0.24
SIX5Q8N196 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.52■□□□□ 0.23
SIX5Q8N196 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.52■□□□□ 0.23
SIX5Q8N196 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIX5Q8N196 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SIX5Q8N196 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIX5Q8N196 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIX5Q8N196 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SIX5Q8N196 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SIX5Q8N196 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SIX5Q8N196 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SIX5Q8N196 SNX33P1-201ENST00000592116 1762 ntBASIC16.51■□□□□ 0.23
SIX5Q8N196 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SIX5Q8N196 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SIX5Q8N196 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SIX5Q8N196 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.51■□□□□ 0.23
SIX5Q8N196 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.51■□□□□ 0.23
SIX5Q8N196 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 AL162726.2-201ENST00000438986 1017 ntBASIC16.51■□□□□ 0.23
SIX5Q8N196 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.51■□□□□ 0.23
SIX5Q8N196 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.51■□□□□ 0.23
SIX5Q8N196 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.51■□□□□ 0.23
SIX5Q8N196 TDH-203ENST00000531764 1110 ntBASIC16.51■□□□□ 0.23
SIX5Q8N196 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.51■□□□□ 0.23
SIX5Q8N196 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.51■□□□□ 0.23
SIX5Q8N196 MIR5189-201ENST00000577370 114 ntBASIC16.51■□□□□ 0.23
SIX5Q8N196 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.51■□□□□ 0.23
SIX5Q8N196 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.51■□□□□ 0.23
SIX5Q8N196 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.51■□□□□ 0.23
SIX5Q8N196 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.51■□□□□ 0.23
SIX5Q8N196 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SIX5Q8N196 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.51■□□□□ 0.23
SIX5Q8N196 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIX5Q8N196 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms