Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AC138969.3-201ENST00000546612 1459 ntBASIC16.43■□□□□ 0.22
CHPFQ8IZ52 AC138932.2-201ENST00000548268 1459 ntBASIC16.43■□□□□ 0.22
CHPFQ8IZ52 AC126755.4-201ENST00000549796 1459 ntBASIC16.43■□□□□ 0.22
CHPFQ8IZ52 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 AC093004.1-201ENST00000508850 424 ntBASIC16.43■□□□□ 0.22
CHPFQ8IZ52 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 AL139384.1-201ENST00000612143 3047 ntBASIC16.43■□□□□ 0.22
CHPFQ8IZ52 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CHPFQ8IZ52 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 SDHAP3-202ENST00000515467 728 ntBASIC16.42■□□□□ 0.22
CHPFQ8IZ52 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHPFQ8IZ52 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 AC098614.1-201ENST00000368528 745 ntBASIC16.41■□□□□ 0.22
CHPFQ8IZ52 AC114501.2-201ENST00000439631 535 ntBASIC16.41■□□□□ 0.22
CHPFQ8IZ52 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 SPDYE18-201ENST00000510091 1050 ntBASIC16.41■□□□□ 0.22
CHPFQ8IZ52 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 AL365330.1-201ENST00000607459 531 ntBASIC16.41■□□□□ 0.22
CHPFQ8IZ52 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 AC046158.3-201ENST00000624947 2558 ntBASIC16.41■□□□□ 0.22
CHPFQ8IZ52 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHPFQ8IZ52 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms