Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SCUBE3Q8IX30 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 AL691432.1-201ENST00000596308 1422 ntBASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 BANF1P1-201ENST00000553684 263 ntBASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 AC105021.1-202ENST00000570572 669 ntBASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 AC007967.4-201ENST00000614700 386 ntBASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 CDC14C-201ENST00000428251 1719 ntBASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 AP003680.1-201ENST00000598970 3660 ntBASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SCUBE3Q8IX30 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 TUBB3P1-201ENST00000405796 1332 ntBASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 LINC02447-202ENST00000501888 2146 ntBASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 AC134407.2-201ENST00000625089 1978 ntBASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 RN7SL828P-201ENST00000607615 303 ntBASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 AC008894.3-201ENST00000624324 3103 ntBASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCUBE3Q8IX30 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.96■□□□□ 0.31
SCUBE3Q8IX30 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms