Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC60Q8IWA6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 AL596087.1-201ENST00000400979 1969 ntBASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 DFFBP1-201ENST00000433250 979 ntBASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 AC023310.3-201ENST00000557027 670 ntBASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 AC100756.1-201ENST00000562736 682 ntBASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 AC138749.3-201ENST00000567691 622 ntBASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 AC092337.1-201ENST00000568699 1129 ntBASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 AC116165.1-201ENST00000611806 668 ntBASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
CCDC60Q8IWA6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 MTHFR-217ENST00000641820 1569 ntBASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 AC074338.1-201ENST00000416825 156 ntBASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 AL353779.1-201ENST00000434793 351 ntBASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 AC093004.1-201ENST00000508850 424 ntBASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 TP53TG3HP-202ENST00000569755 579 ntBASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.84■□□□□ 0.45
CCDC60Q8IWA6 LINC01115-203ENST00000606068 577 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms