Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 MED15P5-201ENST00000423150 992 ntBASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 RNA5SP416-201ENST00000516838 111 ntBASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
LINC00346Q8IVM7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 BX640515.1-201ENST00000617215 977 ntBASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00346Q8IVM7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.33□□□□□ -0.11
LINC00346Q8IVM7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00346Q8IVM7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
LINC00346Q8IVM7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
LINC00346Q8IVM7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LINC00346Q8IVM7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00346Q8IVM7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
LINC00346Q8IVM7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 KRT18P3-201ENST00000451602 1288 ntBASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 PRYP6-201ENST00000514804 343 ntBASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 AC106730.1-201ENST00000566722 1090 ntBASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 AP002472.1-201ENST00000577490 586 ntBASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms