Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 AL139384.1-201ENST00000612143 3047 ntBASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 AC007950.2-201ENST00000615045 2347 ntBASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 CDC14C-201ENST00000428251 1719 ntBASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 LINC02447-202ENST00000501888 2146 ntBASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RAB11FIP4Q86YS3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 AC134407.2-201ENST00000625089 1978 ntBASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 TSEN15P1-201ENST00000423257 515 ntBASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 GPALPP1-207ENST00000611650 899 ntBASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 AC093028.1-201ENST00000622998 982 ntBASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 LINC00628-201ENST00000628516 1289 ntBASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RAB11FIP4Q86YS3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 HLA-H-201ENST00000383620 1096 ntBASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 MIR4321-201ENST00000592276 80 ntBASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB11FIP4Q86YS3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms