Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
USP31Q70CQ4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
USP31Q70CQ4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
USP31Q70CQ4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
USP31Q70CQ4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP31Q70CQ4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.28■■□□□ 1
USP31Q70CQ4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
USP31Q70CQ4 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
USP31Q70CQ4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC21.27■■□□□ 1
USP31Q70CQ4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC21.27■■□□□ 1
USP31Q70CQ4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC21.27■■□□□ 1
USP31Q70CQ4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.27■■□□□ 1
USP31Q70CQ4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.27■■□□□ 1
USP31Q70CQ4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
USP31Q70CQ4 ACKR1-201ENST00000368121 1240 ntBASIC21.27■■□□□ 1
USP31Q70CQ4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP31Q70CQ4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP31Q70CQ4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
USP31Q70CQ4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP31Q70CQ4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC21.27■■□□□ 1
USP31Q70CQ4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC21.27■■□□□ 1
USP31Q70CQ4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP31Q70CQ4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.27■■□□□ 1
USP31Q70CQ4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
USP31Q70CQ4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP31Q70CQ4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP31Q70CQ4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC21.27■■□□□ 1
USP31Q70CQ4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
USP31Q70CQ4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
USP31Q70CQ4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.27■■□□□ 1
USP31Q70CQ4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP31Q70CQ4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
USP31Q70CQ4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.27■■□□□ 1
USP31Q70CQ4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC21.27■■□□□ 1
USP31Q70CQ4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC21.27■□□□□ 0.99
USP31Q70CQ4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC21.27■□□□□ 0.99
USP31Q70CQ4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 AC093813.1-201ENST00000605066 256 ntBASIC21.26■□□□□ 0.99
USP31Q70CQ4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 AC018892.3-201ENST00000623986 2499 ntBASIC21.26■□□□□ 0.99
USP31Q70CQ4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
USP31Q70CQ4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP31Q70CQ4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
USP31Q70CQ4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC21.25■□□□□ 0.99
USP31Q70CQ4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
USP31Q70CQ4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.25■□□□□ 0.99
USP31Q70CQ4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.25■□□□□ 0.99
USP31Q70CQ4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP31Q70CQ4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP31Q70CQ4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.24■□□□□ 0.99
USP31Q70CQ4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP31Q70CQ4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
USP31Q70CQ4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USP31Q70CQ4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC21.24■□□□□ 0.99
USP31Q70CQ4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
USP31Q70CQ4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC21.24■□□□□ 0.99
USP31Q70CQ4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.24■□□□□ 0.99
USP31Q70CQ4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms