Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC149Q6ZUS6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC149Q6ZUS6 AL592424.1-201ENST00000563624 1536 ntBASIC16.9■□□□□ 0.3
CCDC149Q6ZUS6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC149Q6ZUS6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC149Q6ZUS6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC149Q6ZUS6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.3
CCDC149Q6ZUS6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CCDC149Q6ZUS6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC149Q6ZUS6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC149Q6ZUS6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 KRT43P-201ENST00000434019 910 ntBASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 MIR8072-201ENST00000614241 80 ntBASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 MIR6775-201ENST00000617557 69 ntBASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC149Q6ZUS6 Z97205.2-201ENST00000564697 1639 ntBASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 CLK3P2-201ENST00000427566 1453 ntBASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 AC078925.2-201ENST00000624013 1973 ntBASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 AC104989.1-201ENST00000519711 778 ntBASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 AC092552.1-201ENST00000547243 906 ntBASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC149Q6ZUS6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC149Q6ZUS6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC149Q6ZUS6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC149Q6ZUS6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CCDC149Q6ZUS6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC149Q6ZUS6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC149Q6ZUS6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC149Q6ZUS6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms