Protein–RNA interactions for Protein: Q6UXH8

CCBE1, Collagen and calcium-binding EGF domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1Q6UXH8 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 NUS1P1-201ENST00000446295 882 ntBASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 AC068472.1-201ENST00000474589 881 ntBASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 AC074051.2-201ENST00000565115 352 ntBASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 AC012615.1-201ENST00000565797 1299 ntBASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 CR383656.2-201ENST00000548656 2254 ntBASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.45□□□□□ -0.1
CCBE1Q6UXH8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 PTENP1-202ENST00000532280 3996 ntBASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 IGHV3-47-201ENST00000425060 335 ntBASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 KRT17P6-201ENST00000453795 1220 ntBASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 AC104819.1-201ENST00000504587 486 ntBASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 AC011840.4-201ENST00000578471 627 ntBASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 GGT3P-204ENST00000453783 1664 ntBASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 MYO15B-237ENST00000642007 4893 ntBASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.44□□□□□ -0.1
CCBE1Q6UXH8 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCBE1Q6UXH8 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.43□□□□□ -0.1
CCBE1Q6UXH8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCBE1Q6UXH8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms