Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 AL031432.2-201ENST00000566714 459 ntBASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 AL928711.1-201ENST00000570165 459 ntBASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 AC117500.6-201ENST00000624871 588 ntBASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMARCD3Q6STE5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 EMBP1-201ENST00000458200 901 ntBASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 KRT18P56-201ENST00000507275 550 ntBASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 MIR4751-201ENST00000578027 74 ntBASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.8□□□□□ -0.04
SMARCD3Q6STE5 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 AL513480.1-201ENST00000451731 511 ntBASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMARCD3Q6STE5 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms