Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTR9Q6PD62 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTR9Q6PD62 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTR9Q6PD62 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CTR9Q6PD62 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTR9Q6PD62 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CTR9Q6PD62 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.14■□□□□ 0.66
CTR9Q6PD62 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTR9Q6PD62 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTR9Q6PD62 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTR9Q6PD62 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTR9Q6PD62 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTR9Q6PD62 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTR9Q6PD62 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.14■□□□□ 0.65
CTR9Q6PD62 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTR9Q6PD62 SERBP1P5-201ENST00000510079 1181 ntBASIC19.14■□□□□ 0.65
CTR9Q6PD62 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTR9Q6PD62 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 AC008761.3-201ENST00000624803 892 ntBASIC19.14■□□□□ 0.65
CTR9Q6PD62 AC004840.1-201ENST00000636359 365 ntBASIC19.14■□□□□ 0.65
CTR9Q6PD62 AL033527.5-202ENST00000641632 1098 ntBASIC19.14■□□□□ 0.65
CTR9Q6PD62 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTR9Q6PD62 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTR9Q6PD62 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTR9Q6PD62 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.14■□□□□ 0.65
CTR9Q6PD62 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTR9Q6PD62 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 FAM207CP-201ENST00000443486 507 ntBASIC19.13■□□□□ 0.65
CTR9Q6PD62 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 ZNF890P-202ENST00000530367 1156 ntBASIC19.13■□□□□ 0.65
CTR9Q6PD62 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTR9Q6PD62 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CTR9Q6PD62 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTR9Q6PD62 AC004987.2-201ENST00000395959 1148 ntBASIC19.12■□□□□ 0.65
CTR9Q6PD62 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTR9Q6PD62 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms