Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 REXO1L8P-201ENST00000604378 1897 ntBASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 ACKR1-201ENST00000368121 1240 ntBASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 KRT18P43-201ENST00000469825 1281 ntBASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 AC022137.2-201ENST00000503482 481 ntBASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 HNRNPUP1-201ENST00000554987 333 ntBASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 GNRHR2-203ENST00000581100 1187 ntBASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.16■□□□□ 0.34
CNKSR3Q6P9H4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 AC006033.1-201ENST00000440505 426 ntBASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 AL133373.2-201ENST00000623187 2828 ntBASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CNKSR3Q6P9H4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CNKSR3Q6P9H4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CNKSR3Q6P9H4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CNKSR3Q6P9H4 CNN2P8-201ENST00000421872 913 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms