Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDH1Q08174 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDH1Q08174 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 SPDYE11-202ENST00000450699 704 ntBASIC15.6■□□□□ 0.09
PCDH1Q08174 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDH1Q08174 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDH1Q08174 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 SPDYE9P-201ENST00000570642 692 ntBASIC15.6■□□□□ 0.09
PCDH1Q08174 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 SPDYE10P-202ENST00000612005 668 ntBASIC15.6■□□□□ 0.09
PCDH1Q08174 SPDYE8P-202ENST00000612377 668 ntBASIC15.6■□□□□ 0.09
PCDH1Q08174 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDH1Q08174 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.6■□□□□ 0.09
PCDH1Q08174 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PCDH1Q08174 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.6■□□□□ 0.09
PCDH1Q08174 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
PCDH1Q08174 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDH1Q08174 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
PCDH1Q08174 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDH1Q08174 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDH1Q08174 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDH1Q08174 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDH1Q08174 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDH1Q08174 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDH1Q08174 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 ELL2P1-201ENST00000413990 1906 ntBASIC15.59■□□□□ 0.09
PCDH1Q08174 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDH1Q08174 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.59■□□□□ 0.09
PCDH1Q08174 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDH1Q08174 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDH1Q08174 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH1Q08174 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH1Q08174 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDH1Q08174 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDH1Q08174 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.59■□□□□ 0.09
PCDH1Q08174 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH1Q08174 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.59■□□□□ 0.09
PCDH1Q08174 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.59■□□□□ 0.09
PCDH1Q08174 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PCDH1Q08174 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PCDH1Q08174 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
PCDH1Q08174 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
PCDH1Q08174 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.59■□□□□ 0.09
PCDH1Q08174 AL691432.1-201ENST00000596308 1422 ntBASIC15.59■□□□□ 0.09
PCDH1Q08174 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PCDH1Q08174 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
PCDH1Q08174 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH1Q08174 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH1Q08174 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH1Q08174 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDH1Q08174 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDH1Q08174 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH1Q08174 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PCDH1Q08174 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.58■□□□□ 0.08
PCDH1Q08174 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH1Q08174 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH1Q08174 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH1Q08174 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH1Q08174 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH1Q08174 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDH1Q08174 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH1Q08174 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDH1Q08174 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDH1Q08174 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH1Q08174 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH1Q08174 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH1Q08174 DNAJB3-201ENST00000446806 729 ntBASIC15.58■□□□□ 0.08
PCDH1Q08174 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.58■□□□□ 0.08
PCDH1Q08174 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.58■□□□□ 0.08
PCDH1Q08174 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.58■□□□□ 0.08
PCDH1Q08174 AC005829.1-201ENST00000570002 483 ntBASIC15.58■□□□□ 0.08
PCDH1Q08174 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDH1Q08174 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDH1Q08174 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.58■□□□□ 0.08
PCDH1Q08174 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PCDH1Q08174 AC105339.1-204ENST00000636249 355 ntBASIC15.58■□□□□ 0.08
PCDH1Q08174 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms