Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.69□□□□□ -0.22
COL10A1Q03692 AL355306.1-201ENST00000415580 579 ntBASIC13.69□□□□□ -0.22
COL10A1Q03692 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.69□□□□□ -0.22
COL10A1Q03692 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.69□□□□□ -0.22
COL10A1Q03692 AC004832.2-201ENST00000426397 482 ntBASIC13.69□□□□□ -0.22
COL10A1Q03692 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.69□□□□□ -0.22
COL10A1Q03692 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.69□□□□□ -0.22
COL10A1Q03692 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.69□□□□□ -0.22
COL10A1Q03692 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.69□□□□□ -0.22
COL10A1Q03692 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.69□□□□□ -0.22
COL10A1Q03692 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
COL10A1Q03692 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.69□□□□□ -0.22
COL10A1Q03692 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.69□□□□□ -0.22
COL10A1Q03692 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
COL10A1Q03692 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
COL10A1Q03692 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
COL10A1Q03692 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
COL10A1Q03692 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.68□□□□□ -0.22
COL10A1Q03692 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
COL10A1Q03692 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.68□□□□□ -0.22
COL10A1Q03692 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.68□□□□□ -0.22
COL10A1Q03692 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
COL10A1Q03692 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 YBX2P1-201ENST00000394192 760 ntBASIC13.68□□□□□ -0.22
COL10A1Q03692 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.68□□□□□ -0.22
COL10A1Q03692 TFAMP1-201ENST00000412727 736 ntBASIC13.68□□□□□ -0.22
COL10A1Q03692 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.68□□□□□ -0.22
COL10A1Q03692 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.68□□□□□ -0.22
COL10A1Q03692 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.68□□□□□ -0.22
COL10A1Q03692 AL135744.1-201ENST00000565098 629 ntBASIC13.68□□□□□ -0.22
COL10A1Q03692 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.68□□□□□ -0.22
COL10A1Q03692 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.68□□□□□ -0.22
COL10A1Q03692 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.68□□□□□ -0.22
COL10A1Q03692 MTDHP5-201ENST00000598980 586 ntBASIC13.68□□□□□ -0.22
COL10A1Q03692 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 AC092902.6-201ENST00000641783 218 ntBASIC13.68□□□□□ -0.22
COL10A1Q03692 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
COL10A1Q03692 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.68□□□□□ -0.22
COL10A1Q03692 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
COL10A1Q03692 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
COL10A1Q03692 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.68□□□□□ -0.22
COL10A1Q03692 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.68□□□□□ -0.22
COL10A1Q03692 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.68□□□□□ -0.22
COL10A1Q03692 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL10A1Q03692 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
COL10A1Q03692 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.67□□□□□ -0.22
COL10A1Q03692 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.67□□□□□ -0.22
COL10A1Q03692 AKAP8P1-201ENST00000434743 1349 ntBASIC13.67□□□□□ -0.22
COL10A1Q03692 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
COL10A1Q03692 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
COL10A1Q03692 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.67□□□□□ -0.22
COL10A1Q03692 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.67□□□□□ -0.22
COL10A1Q03692 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.67□□□□□ -0.22
COL10A1Q03692 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.67□□□□□ -0.22
COL10A1Q03692 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
COL10A1Q03692 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL10A1Q03692 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms