Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX4P78413 AP001059.3-201ENST00000619053 235 ntBASIC16.91■□□□□ 0.3
IRX4P78413 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
IRX4P78413 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.91■□□□□ 0.3
IRX4P78413 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 AC129492.6-201ENST00000611383 1305 ntBASIC16.91■□□□□ 0.3
IRX4P78413 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 AL513523.2-202ENST00000427283 2040 ntBASIC16.91■□□□□ 0.3
IRX4P78413 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IRX4P78413 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
IRX4P78413 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IRX4P78413 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
IRX4P78413 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.9■□□□□ 0.3
IRX4P78413 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.9■□□□□ 0.3
IRX4P78413 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.9■□□□□ 0.3
IRX4P78413 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.9■□□□□ 0.3
IRX4P78413 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.9■□□□□ 0.3
IRX4P78413 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.9■□□□□ 0.3
IRX4P78413 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
IRX4P78413 SLC25A6P2-201ENST00000497974 877 ntBASIC16.9■□□□□ 0.3
IRX4P78413 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.9■□□□□ 0.3
IRX4P78413 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.9■□□□□ 0.3
IRX4P78413 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.9■□□□□ 0.3
IRX4P78413 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
IRX4P78413 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.9■□□□□ 0.3
IRX4P78413 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
IRX4P78413 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.9■□□□□ 0.3
IRX4P78413 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
IRX4P78413 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.9■□□□□ 0.3
IRX4P78413 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IRX4P78413 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
IRX4P78413 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.9■□□□□ 0.3
IRX4P78413 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
IRX4P78413 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
IRX4P78413 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
IRX4P78413 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
IRX4P78413 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
IRX4P78413 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
IRX4P78413 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.89■□□□□ 0.29
IRX4P78413 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
IRX4P78413 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.89■□□□□ 0.29
IRX4P78413 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.89■□□□□ 0.29
IRX4P78413 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.89■□□□□ 0.29
IRX4P78413 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
IRX4P78413 AC107890.1-201ENST00000422478 521 ntBASIC16.89■□□□□ 0.29
IRX4P78413 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.89■□□□□ 0.29
IRX4P78413 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.89■□□□□ 0.29
IRX4P78413 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
IRX4P78413 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.89■□□□□ 0.29
IRX4P78413 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 NORAD-201ENST00000565493 5339 ntBASIC16.89■□□□□ 0.29
IRX4P78413 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms