Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC068587.3-201ENST00000526613 355 ntBASIC18.22■□□□□ 0.51
CCNA1P78396 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCNA1P78396 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.22■□□□□ 0.51
CCNA1P78396 AC009486.1-201ENST00000569860 813 ntBASIC18.22■□□□□ 0.51
CCNA1P78396 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.22■□□□□ 0.51
CCNA1P78396 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNA1P78396 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.22■□□□□ 0.51
CCNA1P78396 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CCNA1P78396 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNA1P78396 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCNA1P78396 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNA1P78396 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.22■□□□□ 0.51
CCNA1P78396 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCNA1P78396 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNA1P78396 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CCNA1P78396 TUBB1P2-201ENST00000422712 1306 ntBASIC18.22■□□□□ 0.51
CCNA1P78396 TUBB1P1-201ENST00000503144 1300 ntBASIC18.22■□□□□ 0.51
CCNA1P78396 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNA1P78396 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCNA1P78396 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCNA1P78396 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.21■□□□□ 0.51
CCNA1P78396 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCNA1P78396 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.21■□□□□ 0.51
CCNA1P78396 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCNA1P78396 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CCNA1P78396 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.21■□□□□ 0.51
CCNA1P78396 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 FAM21FP-201ENST00000426241 1131 ntBASIC18.21■□□□□ 0.51
CCNA1P78396 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.21■□□□□ 0.51
CCNA1P78396 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 SLED1-202ENST00000512051 380 ntBASIC18.21■□□□□ 0.51
CCNA1P78396 RNA5SP412-201ENST00000516234 123 ntBASIC18.21■□□□□ 0.51
CCNA1P78396 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.21■□□□□ 0.51
CCNA1P78396 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.21■□□□□ 0.51
CCNA1P78396 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CCNA1P78396 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.21■□□□□ 0.51
CCNA1P78396 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.21■□□□□ 0.51
CCNA1P78396 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCNA1P78396 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.21■□□□□ 0.51
CCNA1P78396 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCNA1P78396 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.21■□□□□ 0.51
CCNA1P78396 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCNA1P78396 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CCNA1P78396 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCNA1P78396 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCNA1P78396 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CCNA1P78396 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNA1P78396 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CCNA1P78396 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNA1P78396 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNA1P78396 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNA1P78396 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNA1P78396 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCNA1P78396 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCNA1P78396 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNA1P78396 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.2■□□□□ 0.5
CCNA1P78396 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.2■□□□□ 0.5
CCNA1P78396 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCNA1P78396 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.2■□□□□ 0.5
CCNA1P78396 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCNA1P78396 RPL7P3-201ENST00000441388 714 ntBASIC18.2■□□□□ 0.5
CCNA1P78396 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNA1P78396 AL355994.2-201ENST00000447882 704 ntBASIC18.2■□□□□ 0.5
CCNA1P78396 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.2■□□□□ 0.5
CCNA1P78396 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNA1P78396 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNA1P78396 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.2■□□□□ 0.5
CCNA1P78396 AC124283.3-201ENST00000570869 594 ntBASIC18.2■□□□□ 0.5
CCNA1P78396 MIR4538-201ENST00000581377 78 ntBASIC18.2■□□□□ 0.5
CCNA1P78396 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNA1P78396 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.2■□□□□ 0.5
CCNA1P78396 PCDHB18P-201ENST00000524813 2368 ntBASIC18.2■□□□□ 0.5
CCNA1P78396 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNA1P78396 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNA1P78396 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNA1P78396 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CCNA1P78396 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNA1P78396 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCNA1P78396 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.2■□□□□ 0.5
CCNA1P78396 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCNA1P78396 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms