Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AC002347.1-201ENST00000569543 541 ntBASIC16.36■□□□□ 0.21
PRAMEP78395 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEP78395 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEP78395 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEP78395 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.36■□□□□ 0.21
PRAMEP78395 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEP78395 PMS2P7-201ENST00000506558 1336 ntBASIC16.36■□□□□ 0.21
PRAMEP78395 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PRAMEP78395 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 AL365203.3-201ENST00000609742 2057 ntBASIC16.36■□□□□ 0.21
PRAMEP78395 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PRAMEP78395 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRAMEP78395 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.36■□□□□ 0.21
PRAMEP78395 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PRAMEP78395 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.35■□□□□ 0.21
PRAMEP78395 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PRAMEP78395 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEP78395 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEP78395 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEP78395 FAM58CP-201ENST00000435741 640 ntBASIC16.35■□□□□ 0.21
PRAMEP78395 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEP78395 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.35■□□□□ 0.21
PRAMEP78395 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEP78395 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEP78395 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.35■□□□□ 0.21
PRAMEP78395 AC099522.2-201ENST00000607001 744 ntBASIC16.35■□□□□ 0.21
PRAMEP78395 AC091812.2-201ENST00000619081 385 ntBASIC16.35■□□□□ 0.21
PRAMEP78395 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEP78395 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.35■□□□□ 0.21
PRAMEP78395 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEP78395 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
PRAMEP78395 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEP78395 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEP78395 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEP78395 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEP78395 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEP78395 AC010491.1-201ENST00000563101 2797 ntBASIC16.35■□□□□ 0.21
PRAMEP78395 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
PRAMEP78395 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.35■□□□□ 0.21
PRAMEP78395 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEP78395 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PRAMEP78395 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
PRAMEP78395 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.34■□□□□ 0.21
PRAMEP78395 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRAMEP78395 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEP78395 AC126755.1-201ENST00000525846 6405 ntBASIC16.34■□□□□ 0.21
PRAMEP78395 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.34■□□□□ 0.21
PRAMEP78395 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 MIR574-201ENST00000385209 96 ntBASIC16.34■□□□□ 0.21
PRAMEP78395 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 POLD2P1-201ENST00000511220 997 ntBASIC16.34■□□□□ 0.21
PRAMEP78395 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.34■□□□□ 0.21
PRAMEP78395 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.34■□□□□ 0.21
PRAMEP78395 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 AL365330.1-201ENST00000607459 531 ntBASIC16.34■□□□□ 0.21
PRAMEP78395 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEP78395 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEP78395 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.34■□□□□ 0.21
PRAMEP78395 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
PRAMEP78395 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRAMEP78395 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms