Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
GABREP78334 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GABREP78334 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.31■□□□□ 0.04
GABREP78334 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 CTBP2P5-201ENST00000454986 1264 ntBASIC15.31■□□□□ 0.04
GABREP78334 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
GABREP78334 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.31■□□□□ 0.04
GABREP78334 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.31■□□□□ 0.04
GABREP78334 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.31■□□□□ 0.04
GABREP78334 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.31■□□□□ 0.04
GABREP78334 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.31■□□□□ 0.04
GABREP78334 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.31■□□□□ 0.04
GABREP78334 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.31■□□□□ 0.04
GABREP78334 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.31■□□□□ 0.04
GABREP78334 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
GABREP78334 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.31■□□□□ 0.04
GABREP78334 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.31■□□□□ 0.04
GABREP78334 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GABREP78334 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.31■□□□□ 0.04
GABREP78334 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GABREP78334 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GABREP78334 AC009053.2-201ENST00000563701 2365 ntBASIC15.31■□□□□ 0.04
GABREP78334 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GABREP78334 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
GABREP78334 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GABREP78334 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.3■□□□□ 0.04
GABREP78334 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.3■□□□□ 0.04
GABREP78334 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.3■□□□□ 0.04
GABREP78334 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.3■□□□□ 0.04
GABREP78334 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.3■□□□□ 0.04
GABREP78334 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.3■□□□□ 0.04
GABREP78334 KLF2P4-201ENST00000451959 1225 ntBASIC15.3■□□□□ 0.04
GABREP78334 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.3■□□□□ 0.04
GABREP78334 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
GABREP78334 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
GABREP78334 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.3■□□□□ 0.04
GABREP78334 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GABREP78334 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.3■□□□□ 0.04
GABREP78334 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
GABREP78334 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
GABREP78334 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 GPR182-203ENST00000622922 591 ntBASIC15.3■□□□□ 0.04
GABREP78334 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
GABREP78334 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.3■□□□□ 0.04
GABREP78334 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
GABREP78334 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.3■□□□□ 0.04
GABREP78334 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
GABREP78334 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GABREP78334 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
GABREP78334 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.29■□□□□ 0.04
GABREP78334 PDIA3P1-201ENST00000471856 1510 ntBASIC15.29■□□□□ 0.04
GABREP78334 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
GABREP78334 KRT8P44-201ENST00000441609 1350 ntBASIC15.29■□□□□ 0.04
GABREP78334 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
GABREP78334 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.29■□□□□ 0.04
GABREP78334 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
GABREP78334 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.29■□□□□ 0.04
GABREP78334 FO393414.2-201ENST00000405153 598 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms