Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.94□□□□□ -0.18
AP3S2P59780 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
AP3S2P59780 PMPCAP1-201ENST00000508114 1576 ntBASIC13.94□□□□□ -0.18
AP3S2P59780 AC008677.1-201ENST00000519230 1561 ntBASIC13.94□□□□□ -0.18
AP3S2P59780 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.94□□□□□ -0.18
AP3S2P59780 RNF126P1-202ENST00000569893 925 ntBASIC13.94□□□□□ -0.18
AP3S2P59780 AL592071.1-201ENST00000611956 408 ntBASIC13.94□□□□□ -0.18
AP3S2P59780 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 AC131009.4-201ENST00000624048 1740 ntBASIC13.94□□□□□ -0.18
AP3S2P59780 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
AP3S2P59780 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
AP3S2P59780 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
AP3S2P59780 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
AP3S2P59780 AC148477.5-201ENST00000625164 1645 ntBASIC13.93□□□□□ -0.18
AP3S2P59780 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 KRT18P22-201ENST00000402024 1347 ntBASIC13.93□□□□□ -0.18
AP3S2P59780 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
AP3S2P59780 U82695.1-201ENST00000635752 1889 ntBASIC13.93□□□□□ -0.18
AP3S2P59780 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.93□□□□□ -0.18
AP3S2P59780 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.93□□□□□ -0.18
AP3S2P59780 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
AP3S2P59780 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 MMP23A-201ENST00000234610 1017 ntBASIC13.93□□□□□ -0.18
AP3S2P59780 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 AC246785.2-201ENST00000432512 513 ntBASIC13.93□□□□□ -0.18
AP3S2P59780 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
AP3S2P59780 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.93□□□□□ -0.18
AP3S2P59780 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.93□□□□□ -0.18
AP3S2P59780 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
AP3S2P59780 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
AP3S2P59780 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.93□□□□□ -0.18
AP3S2P59780 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
AP3S2P59780 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.93□□□□□ -0.18
AP3S2P59780 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
AP3S2P59780 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.93□□□□□ -0.18
AP3S2P59780 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
AP3S2P59780 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.92□□□□□ -0.18
AP3S2P59780 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
AP3S2P59780 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
AP3S2P59780 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.92□□□□□ -0.18
AP3S2P59780 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
AP3S2P59780 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
AP3S2P59780 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms