Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.88□□□□□ -0.03
CDH11P55287 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH11P55287 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH11P55287 AC087163.2-201ENST00000457299 853 ntBASIC14.88□□□□□ -0.03
CDH11P55287 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH11P55287 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH11P55287 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.88□□□□□ -0.03
CDH11P55287 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.88□□□□□ -0.03
CDH11P55287 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH11P55287 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 MTDHP5-201ENST00000598980 586 ntBASIC14.88□□□□□ -0.03
CDH11P55287 GGTLC5P-201ENST00000617623 998 ntBASIC14.88□□□□□ -0.03
CDH11P55287 REXO1L3P-201ENST00000622202 1288 ntBASIC14.88□□□□□ -0.03
CDH11P55287 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDH11P55287 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CDH11P55287 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CDH11P55287 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.88□□□□□ -0.03
CDH11P55287 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDH11P55287 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH11P55287 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH11P55287 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH11P55287 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.87□□□□□ -0.03
CDH11P55287 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH11P55287 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CDH11P55287 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH11P55287 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH11P55287 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH11P55287 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH11P55287 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH11P55287 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH11P55287 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 AC018845.2-201ENST00000568326 409 ntBASIC14.87□□□□□ -0.03
CDH11P55287 CYP2A7P1-201ENST00000595391 815 ntBASIC14.87□□□□□ -0.03
CDH11P55287 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDH11P55287 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH11P55287 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH11P55287 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 AP002414.2-201ENST00000591780 3365 ntBASIC14.87□□□□□ -0.03
CDH11P55287 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDH11P55287 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH11P55287 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH11P55287 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDH11P55287 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDH11P55287 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CDH11P55287 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 AC069224.1-201ENST00000566372 1715 ntBASIC14.86□□□□□ -0.03
CDH11P55287 PI4KAP1-204ENST00000612579 1703 ntBASIC14.86□□□□□ -0.03
CDH11P55287 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH11P55287 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDH11P55287 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH11P55287 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms