Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.3■□□□□ 0.36
RAD23BP54727 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.3■□□□□ 0.36
RAD23BP54727 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.3■□□□□ 0.36
RAD23BP54727 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.3■□□□□ 0.36
RAD23BP54727 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.3■□□□□ 0.36
RAD23BP54727 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAD23BP54727 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAD23BP54727 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAD23BP54727 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAD23BP54727 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAD23BP54727 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.3■□□□□ 0.36
RAD23BP54727 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAD23BP54727 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAD23BP54727 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.3■□□□□ 0.36
RAD23BP54727 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAD23BP54727 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAD23BP54727 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.3■□□□□ 0.36
RAD23BP54727 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.29■□□□□ 0.36
RAD23BP54727 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.29■□□□□ 0.36
RAD23BP54727 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.29■□□□□ 0.36
RAD23BP54727 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.29■□□□□ 0.36
RAD23BP54727 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAD23BP54727 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAD23BP54727 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RAD23BP54727 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAD23BP54727 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 AP001059.3-201ENST00000619053 235 ntBASIC17.29■□□□□ 0.36
RAD23BP54727 LINC00628-201ENST00000628516 1289 ntBASIC17.29■□□□□ 0.36
RAD23BP54727 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.29■□□□□ 0.36
RAD23BP54727 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.29■□□□□ 0.36
RAD23BP54727 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.29■□□□□ 0.36
RAD23BP54727 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RAD23BP54727 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.29■□□□□ 0.36
RAD23BP54727 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD23BP54727 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAD23BP54727 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD23BP54727 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD23BP54727 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RAD23BP54727 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
RAD23BP54727 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
RAD23BP54727 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RAD23BP54727 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RAD23BP54727 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.28■□□□□ 0.36
RAD23BP54727 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.28■□□□□ 0.36
RAD23BP54727 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
RAD23BP54727 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAD23BP54727 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.28■□□□□ 0.36
RAD23BP54727 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD23BP54727 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD23BP54727 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
RAD23BP54727 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RAD23BP54727 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RAD23BP54727 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RAD23BP54727 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAD23BP54727 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD23BP54727 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD23BP54727 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
RAD23BP54727 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD23BP54727 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD23BP54727 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAD23BP54727 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD23BP54727 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.27■□□□□ 0.36
RAD23BP54727 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RAD23BP54727 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAD23BP54727 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAD23BP54727 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD23BP54727 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAD23BP54727 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms