Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA4P52798 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
EFNA4P52798 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNA4P52798 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.48□□□□□ -0.25
EFNA4P52798 TTTY23B-201ENST00000442790 549 ntBASIC13.48□□□□□ -0.25
EFNA4P52798 EEF1DP4-201ENST00000446006 880 ntBASIC13.48□□□□□ -0.25
EFNA4P52798 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.48□□□□□ -0.25
EFNA4P52798 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.48□□□□□ -0.25
EFNA4P52798 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNA4P52798 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
EFNA4P52798 CTBP2P3-201ENST00000585629 1255 ntBASIC13.48□□□□□ -0.25
EFNA4P52798 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA4P52798 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNA4P52798 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA4P52798 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA4P52798 UBALD1-205ENST00000590891 2641 ntBASIC13.48□□□□□ -0.25
EFNA4P52798 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
EFNA4P52798 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.48□□□□□ -0.25
EFNA4P52798 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
EFNA4P52798 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA4P52798 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA4P52798 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA4P52798 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.48□□□□□ -0.25
EFNA4P52798 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA4P52798 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
EFNA4P52798 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
EFNA4P52798 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
EFNA4P52798 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
EFNA4P52798 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
EFNA4P52798 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.47□□□□□ -0.25
EFNA4P52798 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA4P52798 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
EFNA4P52798 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 RN7SL837P-201ENST00000463010 287 ntBASIC13.47□□□□□ -0.25
EFNA4P52798 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.47□□□□□ -0.25
EFNA4P52798 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA4P52798 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA4P52798 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
EFNA4P52798 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.47□□□□□ -0.25
EFNA4P52798 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.47□□□□□ -0.25
EFNA4P52798 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA4P52798 AC017083.2-201ENST00000608069 979 ntBASIC13.47□□□□□ -0.25
EFNA4P52798 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.47□□□□□ -0.25
EFNA4P52798 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.47□□□□□ -0.25
EFNA4P52798 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA4P52798 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA4P52798 CLK3P2-201ENST00000427566 1453 ntBASIC13.47□□□□□ -0.25
EFNA4P52798 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA4P52798 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
EFNA4P52798 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.47□□□□□ -0.25
EFNA4P52798 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.47□□□□□ -0.25
EFNA4P52798 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
EFNA4P52798 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.47□□□□□ -0.25
EFNA4P52798 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.46□□□□□ -0.25
EFNA4P52798 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNA4P52798 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNA4P52798 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNA4P52798 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
EFNA4P52798 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
EFNA4P52798 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
EFNA4P52798 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
EFNA4P52798 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNA4P52798 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
EFNA4P52798 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA4P52798 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA4P52798 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
EFNA4P52798 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA4P52798 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
EFNA4P52798 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA4P52798 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
EFNA4P52798 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
EFNA4P52798 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.46□□□□□ -0.25
EFNA4P52798 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms