Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.78□□□□□ -0.04
SSR4P51571 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.78□□□□□ -0.04
SSR4P51571 SDHAP3-202ENST00000515467 728 ntBASIC14.78□□□□□ -0.04
SSR4P51571 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR4P51571 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR4P51571 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR4P51571 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.78□□□□□ -0.04
SSR4P51571 AC135586.1-201ENST00000539323 574 ntBASIC14.78□□□□□ -0.04
SSR4P51571 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR4P51571 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR4P51571 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSR4P51571 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.78□□□□□ -0.04
SSR4P51571 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR4P51571 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
SSR4P51571 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSR4P51571 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SSR4P51571 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SSR4P51571 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR4P51571 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SSR4P51571 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.78□□□□□ -0.04
SSR4P51571 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSR4P51571 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.77□□□□□ -0.04
SSR4P51571 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR4P51571 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR4P51571 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR4P51571 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
SSR4P51571 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.77□□□□□ -0.04
SSR4P51571 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR4P51571 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
SSR4P51571 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.77□□□□□ -0.04
SSR4P51571 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SSR4P51571 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR4P51571 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR4P51571 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR4P51571 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SSR4P51571 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSR4P51571 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SSR4P51571 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
SSR4P51571 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.77□□□□□ -0.05
SSR4P51571 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.77□□□□□ -0.05
SSR4P51571 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.77□□□□□ -0.05
SSR4P51571 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.77□□□□□ -0.05
SSR4P51571 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.77□□□□□ -0.05
SSR4P51571 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.77□□□□□ -0.05
SSR4P51571 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.77□□□□□ -0.05
SSR4P51571 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.77□□□□□ -0.05
SSR4P51571 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.77□□□□□ -0.05
SSR4P51571 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SSR4P51571 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.77□□□□□ -0.05
SSR4P51571 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.77□□□□□ -0.05
SSR4P51571 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SSR4P51571 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
SSR4P51571 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SSR4P51571 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SSR4P51571 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.77□□□□□ -0.05
SSR4P51571 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR4P51571 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SSR4P51571 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SSR4P51571 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR4P51571 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.76□□□□□ -0.05
SSR4P51571 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.76□□□□□ -0.05
SSR4P51571 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
SSR4P51571 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR4P51571 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR4P51571 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.76□□□□□ -0.05
SSR4P51571 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.76□□□□□ -0.05
SSR4P51571 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SSR4P51571 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR4P51571 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.76□□□□□ -0.05
SSR4P51571 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR4P51571 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR4P51571 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.76□□□□□ -0.05
SSR4P51571 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR4P51571 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms