Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK7P50613 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK7P50613 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK7P50613 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK7P50613 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK7P50613 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.76■□□□□ 0.43
CDK7P50613 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK7P50613 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK7P50613 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK7P50613 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK7P50613 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDK7P50613 RPL13P2-201ENST00000440687 659 ntBASIC17.76■□□□□ 0.43
CDK7P50613 AL355994.2-201ENST00000447882 704 ntBASIC17.76■□□□□ 0.43
CDK7P50613 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.76■□□□□ 0.43
CDK7P50613 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK7P50613 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDK7P50613 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.76■□□□□ 0.43
CDK7P50613 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.76■□□□□ 0.43
CDK7P50613 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDK7P50613 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.76■□□□□ 0.43
CDK7P50613 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.76■□□□□ 0.43
CDK7P50613 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDK7P50613 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK7P50613 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.76■□□□□ 0.43
CDK7P50613 AL022328.1-201ENST00000610050 478 ntBASIC17.76■□□□□ 0.43
CDK7P50613 AL158212.4-201ENST00000624062 1286 ntBASIC17.76■□□□□ 0.43
CDK7P50613 CU634019.7-201ENST00000624153 1185 ntBASIC17.76■□□□□ 0.43
CDK7P50613 FP236241.2-201ENST00000624906 1185 ntBASIC17.76■□□□□ 0.43
CDK7P50613 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDK7P50613 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.76■□□□□ 0.43
CDK7P50613 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CDK7P50613 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK7P50613 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDK7P50613 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK7P50613 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDK7P50613 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDK7P50613 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK7P50613 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CDK7P50613 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDK7P50613 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK7P50613 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK7P50613 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK7P50613 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDK7P50613 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK7P50613 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDK7P50613 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK7P50613 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CDK7P50613 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.75■□□□□ 0.43
CDK7P50613 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.75■□□□□ 0.43
CDK7P50613 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 AC036164.1-201ENST00000570544 333 ntBASIC17.75■□□□□ 0.43
CDK7P50613 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.75■□□□□ 0.43
CDK7P50613 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK7P50613 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK7P50613 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDK7P50613 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.75■□□□□ 0.43
CDK7P50613 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDK7P50613 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CDK7P50613 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDK7P50613 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.75■□□□□ 0.43
CDK7P50613 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.75■□□□□ 0.43
CDK7P50613 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.74■□□□□ 0.43
CDK7P50613 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.74■□□□□ 0.43
CDK7P50613 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDK7P50613 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDK7P50613 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.74■□□□□ 0.43
CDK7P50613 AC092933.1-201ENST00000393644 945 ntBASIC17.74■□□□□ 0.43
CDK7P50613 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDK7P50613 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.74■□□□□ 0.43
CDK7P50613 FO681548.1-201ENST00000455617 1132 ntBASIC17.74■□□□□ 0.43
CDK7P50613 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.74■□□□□ 0.43
CDK7P50613 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 BRI3BPP1-201ENST00000594224 787 ntBASIC17.74■□□□□ 0.43
CDK7P50613 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.74■□□□□ 0.43
CDK7P50613 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDK7P50613 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
CDK7P50613 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.74■□□□□ 0.43
CDK7P50613 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms