Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CSNK1A1P48729 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.42□□□□□ -0.1
CSNK1A1P48729 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 RPSAP43-201ENST00000402237 625 ntBASIC14.41□□□□□ -0.1
CSNK1A1P48729 HAUS4P1-201ENST00000406739 1145 ntBASIC14.41□□□□□ -0.1
CSNK1A1P48729 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 AC142381.1-201ENST00000426099 345 ntBASIC14.41□□□□□ -0.1
CSNK1A1P48729 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 AC112482.1-201ENST00000492080 688 ntBASIC14.41□□□□□ -0.1
CSNK1A1P48729 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 AC105339.1-204ENST00000636249 355 ntBASIC14.41□□□□□ -0.1
CSNK1A1P48729 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1A1P48729 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1A1P48729 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 AC024909.3-201ENST00000611513 2257 ntBASIC14.4□□□□□ -0.1
CSNK1A1P48729 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1A1P48729 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 AC005237.2-201ENST00000434368 219 ntBASIC14.4□□□□□ -0.1
CSNK1A1P48729 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
CSNK1A1P48729 RNA5SP410-201ENST00000516285 106 ntBASIC14.4□□□□□ -0.1
CSNK1A1P48729 LINC01225-203ENST00000563550 1244 ntBASIC14.4□□□□□ -0.1
CSNK1A1P48729 AC022145.2-201ENST00000598203 171 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms