Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TM4SF4P48230 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TM4SF4P48230 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.07■□□□□ 0.48
TM4SF4P48230 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.07■□□□□ 0.48
TM4SF4P48230 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.07■□□□□ 0.48
TM4SF4P48230 AL138799.1-201ENST00000448213 1675 ntBASIC18.07■□□□□ 0.48
TM4SF4P48230 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.07■□□□□ 0.48
TM4SF4P48230 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.07■□□□□ 0.48
TM4SF4P48230 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.07■□□□□ 0.48
TM4SF4P48230 AC079178.1-201ENST00000420915 656 ntBASIC18.07■□□□□ 0.48
TM4SF4P48230 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TM4SF4P48230 EEF1DP6-201ENST00000449232 372 ntBASIC18.07■□□□□ 0.48
TM4SF4P48230 SDHD-202ENST00000525291 790 ntTSL 3 BASIC18.07■□□□□ 0.48
TM4SF4P48230 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 PRKXP1-201ENST00000561423 1122 ntBASIC18.07■□□□□ 0.48
TM4SF4P48230 FGFR3P5-201ENST00000564496 886 ntBASIC18.07■□□□□ 0.48
TM4SF4P48230 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.07■□□□□ 0.48
TM4SF4P48230 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC18.07■□□□□ 0.48
TM4SF4P48230 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.07■□□□□ 0.48
TM4SF4P48230 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TM4SF4P48230 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 AL354989.2-201ENST00000435838 1540 ntBASIC18.07■□□□□ 0.48
TM4SF4P48230 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TM4SF4P48230 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.07■□□□□ 0.48
TM4SF4P48230 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
TM4SF4P48230 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TM4SF4P48230 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
TM4SF4P48230 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TM4SF4P48230 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TM4SF4P48230 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
TM4SF4P48230 REXO1L1P-202ENST00000608646 1974 ntBASIC18.06■□□□□ 0.48
TM4SF4P48230 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TM4SF4P48230 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF4P48230 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.06■□□□□ 0.48
TM4SF4P48230 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TM4SF4P48230 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF4P48230 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF4P48230 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF4P48230 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.06■□□□□ 0.48
TM4SF4P48230 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF4P48230 ACTBP8-201ENST00000403258 1108 ntBASIC18.06■□□□□ 0.48
TM4SF4P48230 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC18.06■□□□□ 0.48
TM4SF4P48230 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF4P48230 Z97180.1-201ENST00000445173 988 ntBASIC18.06■□□□□ 0.48
TM4SF4P48230 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.06■□□□□ 0.48
TM4SF4P48230 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TM4SF4P48230 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.06■□□□□ 0.48
TM4SF4P48230 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.06■□□□□ 0.48
TM4SF4P48230 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TM4SF4P48230 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF4P48230 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.06■□□□□ 0.48
TM4SF4P48230 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.06■□□□□ 0.48
TM4SF4P48230 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.06■□□□□ 0.48
TM4SF4P48230 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.06■□□□□ 0.48
TM4SF4P48230 ECM1P1-201ENST00000604092 1279 ntBASIC18.06■□□□□ 0.48
TM4SF4P48230 BX539320.1-201ENST00000623759 877 ntBASIC18.06■□□□□ 0.48
TM4SF4P48230 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.06■□□□□ 0.48
TM4SF4P48230 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF4P48230 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TM4SF4P48230 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF4P48230 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF4P48230 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF4P48230 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF4P48230 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF4P48230 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.06■□□□□ 0.48
TM4SF4P48230 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF4P48230 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TM4SF4P48230 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.05■□□□□ 0.48
TM4SF4P48230 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TM4SF4P48230 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 TPM3P8-201ENST00000330554 643 ntBASIC18.05■□□□□ 0.48
TM4SF4P48230 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 SNX21-203ENST00000372541 771 ntTSL 2 BASIC18.05■□□□□ 0.48
TM4SF4P48230 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.05■□□□□ 0.48
TM4SF4P48230 AL133267.1-201ENST00000398220 340 ntBASIC18.05■□□□□ 0.48
TM4SF4P48230 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TM4SF4P48230 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.05■□□□□ 0.48
TM4SF4P48230 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TM4SF4P48230 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.05■□□□□ 0.48
TM4SF4P48230 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TM4SF4P48230 RN7SL574P-201ENST00000581512 297 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms