Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 GNAQP1-201ENST00000444815 1067 ntBASIC15.25■□□□□ 0.03
GABRA4P48169 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA4P48169 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
GABRA4P48169 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.25■□□□□ 0.03
GABRA4P48169 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.25■□□□□ 0.03
GABRA4P48169 SPDYE22P-201ENST00000582158 798 ntBASIC15.25■□□□□ 0.03
GABRA4P48169 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA4P48169 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.25■□□□□ 0.03
GABRA4P48169 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.25■□□□□ 0.03
GABRA4P48169 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA4P48169 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
GABRA4P48169 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA4P48169 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
GABRA4P48169 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.25■□□□□ 0.03
GABRA4P48169 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GABRA4P48169 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.25■□□□□ 0.03
GABRA4P48169 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA4P48169 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.25■□□□□ 0.03
GABRA4P48169 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA4P48169 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GABRA4P48169 Z97205.2-201ENST00000564697 1639 ntBASIC15.25■□□□□ 0.03
GABRA4P48169 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GABRA4P48169 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.24■□□□□ 0.03
GABRA4P48169 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
GABRA4P48169 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
GABRA4P48169 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.24■□□□□ 0.03
GABRA4P48169 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
GABRA4P48169 AL596087.1-201ENST00000400979 1969 ntBASIC15.24■□□□□ 0.03
GABRA4P48169 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
GABRA4P48169 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
GABRA4P48169 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
GABRA4P48169 PIN1P1-201ENST00000412108 996 ntBASIC15.24■□□□□ 0.03
GABRA4P48169 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
GABRA4P48169 AL589987.1-201ENST00000453380 819 ntBASIC15.24■□□□□ 0.03
GABRA4P48169 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.24■□□□□ 0.03
GABRA4P48169 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.24■□□□□ 0.03
GABRA4P48169 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.24■□□□□ 0.03
GABRA4P48169 AC190387.1-201ENST00000551683 408 ntBASIC15.24■□□□□ 0.03
GABRA4P48169 AC092337.1-201ENST00000568699 1129 ntBASIC15.24■□□□□ 0.03
GABRA4P48169 SRD5A3P1-201ENST00000603021 949 ntBASIC15.24■□□□□ 0.03
GABRA4P48169 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.24■□□□□ 0.03
GABRA4P48169 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GABRA4P48169 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
GABRA4P48169 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.24■□□□□ 0.03
GABRA4P48169 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.23■□□□□ 0.03
GABRA4P48169 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.23■□□□□ 0.03
GABRA4P48169 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
GABRA4P48169 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GABRA4P48169 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
GABRA4P48169 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.23■□□□□ 0.03
GABRA4P48169 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GABRA4P48169 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.23■□□□□ 0.03
GABRA4P48169 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.23■□□□□ 0.03
GABRA4P48169 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.23■□□□□ 0.03
GABRA4P48169 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.23■□□□□ 0.03
GABRA4P48169 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
GABRA4P48169 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.23■□□□□ 0.03
GABRA4P48169 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
GABRA4P48169 AC074044.1-201ENST00000609673 707 ntBASIC15.23■□□□□ 0.03
GABRA4P48169 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.23■□□□□ 0.03
GABRA4P48169 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.23■□□□□ 0.03
GABRA4P48169 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.23■□□□□ 0.03
GABRA4P48169 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.23■□□□□ 0.03
GABRA4P48169 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 AL662844.4-201ENST00000606367 2838 ntBASIC15.23■□□□□ 0.03
GABRA4P48169 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.23■□□□□ 0.03
GABRA4P48169 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA4P48169 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
GABRA4P48169 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA4P48169 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA4P48169 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms