Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CXCL12P48061 BNIP3P1-202ENST00000550043 1585 ntBASIC15.92■□□□□ 0.14
CXCL12P48061 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL12P48061 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL12P48061 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCL12P48061 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CXCL12P48061 ACKR1-201ENST00000368121 1240 ntBASIC15.91■□□□□ 0.14
CXCL12P48061 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.91■□□□□ 0.14
CXCL12P48061 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CXCL12P48061 POU5F1P6-201ENST00000466990 990 ntBASIC15.91■□□□□ 0.14
CXCL12P48061 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.91■□□□□ 0.14
CXCL12P48061 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCL12P48061 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.91■□□□□ 0.14
CXCL12P48061 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.91■□□□□ 0.14
CXCL12P48061 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
CXCL12P48061 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.91■□□□□ 0.14
CXCL12P48061 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CXCL12P48061 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CXCL12P48061 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCL12P48061 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CXCL12P48061 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.91■□□□□ 0.14
CXCL12P48061 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CXCL12P48061 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCL12P48061 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCL12P48061 CALR4P-201ENST00000431943 946 ntBASIC15.9■□□□□ 0.14
CXCL12P48061 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.9■□□□□ 0.14
CXCL12P48061 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.9■□□□□ 0.14
CXCL12P48061 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.9■□□□□ 0.14
CXCL12P48061 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.9■□□□□ 0.14
CXCL12P48061 FAM86HP-204ENST00000513466 959 ntBASIC15.9■□□□□ 0.14
CXCL12P48061 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCL12P48061 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.9■□□□□ 0.14
CXCL12P48061 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.9■□□□□ 0.14
CXCL12P48061 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.9■□□□□ 0.14
CXCL12P48061 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.9■□□□□ 0.14
CXCL12P48061 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCL12P48061 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCL12P48061 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.9■□□□□ 0.14
CXCL12P48061 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CXCL12P48061 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
CXCL12P48061 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CXCL12P48061 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CXCL12P48061 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
CXCL12P48061 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL12P48061 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL12P48061 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCL12P48061 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL12P48061 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCL12P48061 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CXCL12P48061 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCL12P48061 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL12P48061 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL12P48061 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL12P48061 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.89■□□□□ 0.13
CXCL12P48061 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCL12P48061 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCL12P48061 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL12P48061 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CXCL12P48061 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.89■□□□□ 0.13
CXCL12P48061 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms