Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
BRCC3P46736 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
BRCC3P46736 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.11■□□□□ 0.33
BRCC3P46736 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.1■□□□□ 0.33
BRCC3P46736 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
BRCC3P46736 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.1■□□□□ 0.33
BRCC3P46736 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.1■□□□□ 0.33
BRCC3P46736 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.1■□□□□ 0.33
BRCC3P46736 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.1■□□□□ 0.33
BRCC3P46736 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.1■□□□□ 0.33
BRCC3P46736 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.1■□□□□ 0.33
BRCC3P46736 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 AC006449.6-201ENST00000612330 2296 ntBASIC17.1■□□□□ 0.33
BRCC3P46736 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 AL391825.1-201ENST00000457671 1364 ntBASIC17.1■□□□□ 0.33
BRCC3P46736 AC138969.3-201ENST00000546612 1459 ntBASIC17.1■□□□□ 0.33
BRCC3P46736 AC138932.2-201ENST00000548268 1459 ntBASIC17.1■□□□□ 0.33
BRCC3P46736 AC126755.4-201ENST00000549796 1459 ntBASIC17.1■□□□□ 0.33
BRCC3P46736 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BRCC3P46736 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRCC3P46736 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
BRCC3P46736 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
BRCC3P46736 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.09■□□□□ 0.33
BRCC3P46736 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
BRCC3P46736 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
BRCC3P46736 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.09■□□□□ 0.33
BRCC3P46736 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.09■□□□□ 0.33
BRCC3P46736 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.09■□□□□ 0.33
BRCC3P46736 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.09■□□□□ 0.33
BRCC3P46736 CR383656.12-201ENST00000549567 513 ntBASIC17.09■□□□□ 0.33
BRCC3P46736 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.09■□□□□ 0.33
BRCC3P46736 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.09■□□□□ 0.33
BRCC3P46736 AC092337.1-201ENST00000568699 1129 ntBASIC17.09■□□□□ 0.33
BRCC3P46736 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.09■□□□□ 0.33
BRCC3P46736 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.09■□□□□ 0.33
BRCC3P46736 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.09■□□□□ 0.33
BRCC3P46736 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.09■□□□□ 0.33
BRCC3P46736 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.09■□□□□ 0.33
BRCC3P46736 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.09■□□□□ 0.33
BRCC3P46736 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.09■□□□□ 0.33
BRCC3P46736 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
BRCC3P46736 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.09■□□□□ 0.33
BRCC3P46736 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
BRCC3P46736 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRCC3P46736 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.09■□□□□ 0.33
BRCC3P46736 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRCC3P46736 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.33
BRCC3P46736 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRCC3P46736 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.08■□□□□ 0.33
BRCC3P46736 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRCC3P46736 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
BRCC3P46736 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.08■□□□□ 0.33
BRCC3P46736 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 Z97205.2-201ENST00000564697 1639 ntBASIC17.08■□□□□ 0.32
BRCC3P46736 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.08■□□□□ 0.32
BRCC3P46736 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
BRCC3P46736 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 HAUS4P1-201ENST00000406739 1145 ntBASIC17.08■□□□□ 0.32
BRCC3P46736 AC098850.1-201ENST00000419919 790 ntBASIC17.08■□□□□ 0.32
BRCC3P46736 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.08■□□□□ 0.32
BRCC3P46736 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
BRCC3P46736 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.08■□□□□ 0.32
BRCC3P46736 TIMM17BP1-201ENST00000545713 516 ntBASIC17.08■□□□□ 0.32
BRCC3P46736 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.08■□□□□ 0.32
BRCC3P46736 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms