Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.15□□□□□ -0.14
GDNFP39905 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GDNFP39905 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.14□□□□□ -0.15
GDNFP39905 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.14□□□□□ -0.15
GDNFP39905 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.14□□□□□ -0.15
GDNFP39905 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.14□□□□□ -0.15
GDNFP39905 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GDNFP39905 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
GDNFP39905 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GDNFP39905 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.14□□□□□ -0.15
GDNFP39905 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.14□□□□□ -0.15
GDNFP39905 PRYP5-201ENST00000451909 266 ntBASIC14.14□□□□□ -0.15
GDNFP39905 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
GDNFP39905 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
GDNFP39905 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.14□□□□□ -0.15
GDNFP39905 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.14□□□□□ -0.15
GDNFP39905 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GDNFP39905 MTDHP4-201ENST00000600287 670 ntBASIC14.14□□□□□ -0.15
GDNFP39905 AC025062.2-201ENST00000605477 670 ntBASIC14.14□□□□□ -0.15
GDNFP39905 AL353135.1-201ENST00000606729 504 ntBASIC14.14□□□□□ -0.15
GDNFP39905 AL691432.3-201ENST00000621860 400 ntBASIC14.14□□□□□ -0.15
GDNFP39905 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.14□□□□□ -0.15
GDNFP39905 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.14□□□□□ -0.15
GDNFP39905 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.14□□□□□ -0.15
GDNFP39905 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 KRT8P39-201ENST00000396270 1433 ntBASIC14.14□□□□□ -0.15
GDNFP39905 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.14□□□□□ -0.15
GDNFP39905 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.14□□□□□ -0.15
GDNFP39905 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
GDNFP39905 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GDNFP39905 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
GDNFP39905 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.14□□□□□ -0.15
GDNFP39905 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 AC007292.2-201ENST00000593524 1812 ntBASIC14.13□□□□□ -0.15
GDNFP39905 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GDNFP39905 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 AC092919.2-201ENST00000623631 1645 ntBASIC14.13□□□□□ -0.15
GDNFP39905 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.13□□□□□ -0.15
GDNFP39905 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 AC079781.3-201ENST00000449110 356 ntBASIC14.13□□□□□ -0.15
GDNFP39905 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.13□□□□□ -0.15
GDNFP39905 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.13□□□□□ -0.15
GDNFP39905 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.13□□□□□ -0.15
GDNFP39905 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.13□□□□□ -0.15
GDNFP39905 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GDNFP39905 OR2I1P-210ENST00000642037 4691 ntBASIC14.13□□□□□ -0.15
GDNFP39905 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.13□□□□□ -0.15
GDNFP39905 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.13□□□□□ -0.15
GDNFP39905 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms