Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.68■□□□□ 0.9
RXRBP28702 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 AL627231.1-201ENST00000394467 1125 ntBASIC20.68■□□□□ 0.9
RXRBP28702 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.68■□□□□ 0.9
RXRBP28702 PFN2-206ENST00000461930 606 ntTSL 4 BASIC20.68■□□□□ 0.9
RXRBP28702 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.68■□□□□ 0.9
RXRBP28702 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC20.68■□□□□ 0.9
RXRBP28702 RN7SL163P-201ENST00000583100 276 ntBASIC20.68■□□□□ 0.9
RXRBP28702 BNIP3P13-201ENST00000599968 566 ntBASIC20.68■□□□□ 0.9
RXRBP28702 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RXRBP28702 AC018695.6-201ENST00000614011 534 ntBASIC20.68■□□□□ 0.9
RXRBP28702 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC20.68■□□□□ 0.9
RXRBP28702 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 AC074138.1-201ENST00000611182 1303 ntBASIC20.68■□□□□ 0.9
RXRBP28702 AL354751.1-201ENST00000412768 1863 ntBASIC20.68■□□□□ 0.9
RXRBP28702 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RXRBP28702 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.68■□□□□ 0.9
RXRBP28702 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRBP28702 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.67■□□□□ 0.9
RXRBP28702 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRBP28702 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRBP28702 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.67■□□□□ 0.9
RXRBP28702 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.67■□□□□ 0.9
RXRBP28702 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RXRBP28702 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.67■□□□□ 0.9
RXRBP28702 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RXRBP28702 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC20.67■□□□□ 0.9
RXRBP28702 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RXRBP28702 AC104073.2-201ENST00000453737 312 ntBASIC20.67■□□□□ 0.9
RXRBP28702 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RXRBP28702 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.67■□□□□ 0.9
RXRBP28702 C2orf69P1-201ENST00000563532 1093 ntBASIC20.67■□□□□ 0.9
RXRBP28702 BX539320.1-201ENST00000623759 877 ntBASIC20.67■□□□□ 0.9
RXRBP28702 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.67■□□□□ 0.9
RXRBP28702 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC20.67■□□□□ 0.9
RXRBP28702 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.67■□□□□ 0.9
RXRBP28702 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRBP28702 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.67■□□□□ 0.9
RXRBP28702 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRBP28702 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRBP28702 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.67■□□□□ 0.9
RXRBP28702 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRBP28702 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RXRBP28702 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RXRBP28702 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.67■□□□□ 0.9
RXRBP28702 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.67■□□□□ 0.9
RXRBP28702 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
RXRBP28702 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.66■□□□□ 0.9
RXRBP28702 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 RNMTL1P1-201ENST00000454103 560 ntBASIC20.66■□□□□ 0.9
RXRBP28702 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC20.66■□□□□ 0.9
RXRBP28702 MARK2P5-201ENST00000507649 634 ntBASIC20.66■□□□□ 0.9
RXRBP28702 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.66■□□□□ 0.9
RXRBP28702 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC20.66■□□□□ 0.9
RXRBP28702 AC012158.2-201ENST00000536546 354 ntBASIC20.66■□□□□ 0.9
RXRBP28702 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC20.66■□□□□ 0.9
RXRBP28702 AL031713.1-201ENST00000564813 661 ntBASIC20.66■□□□□ 0.9
RXRBP28702 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC20.66■□□□□ 0.9
RXRBP28702 EIF5AP2-201ENST00000585668 1047 ntBASIC20.66■□□□□ 0.9
RXRBP28702 AC242376.2-201ENST00000619355 883 ntBASIC20.66■□□□□ 0.9
RXRBP28702 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.66■□□□□ 0.9
RXRBP28702 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
RXRBP28702 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.66■□□□□ 0.9
RXRBP28702 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.66■□□□□ 0.9
RXRBP28702 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RXRBP28702 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRBP28702 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRBP28702 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RXRBP28702 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RXRBP28702 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC20.65■□□□□ 0.9
RXRBP28702 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RXRBP28702 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.65■□□□□ 0.9
RXRBP28702 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RXRBP28702 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC20.65■□□□□ 0.9
RXRBP28702 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRBP28702 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RXRBP28702 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.65■□□□□ 0.9
RXRBP28702 TBC1D3J-201ENST00000620719 1426 ntBASIC20.65■□□□□ 0.9
RXRBP28702 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms