Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMLP26374 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMLP26374 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMLP26374 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMLP26374 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMLP26374 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CHMLP26374 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CHMLP26374 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMLP26374 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMLP26374 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 AC004987.2-201ENST00000395959 1148 ntBASIC19.43■□□□□ 0.7
CHMLP26374 AL627223.1-201ENST00000416693 442 ntBASIC19.43■□□□□ 0.7
CHMLP26374 AC005237.2-201ENST00000434368 219 ntBASIC19.43■□□□□ 0.7
CHMLP26374 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.43■□□□□ 0.7
CHMLP26374 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.43■□□□□ 0.7
CHMLP26374 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.43■□□□□ 0.7
CHMLP26374 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.43■□□□□ 0.7
CHMLP26374 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.43■□□□□ 0.7
CHMLP26374 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.43■□□□□ 0.7
CHMLP26374 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.43■□□□□ 0.7
CHMLP26374 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.43■□□□□ 0.7
CHMLP26374 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMLP26374 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMLP26374 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMLP26374 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHMLP26374 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CHMLP26374 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 CYP4F24P-201ENST00000586049 1580 ntBASIC19.42■□□□□ 0.7
CHMLP26374 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHMLP26374 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 ALG1L8P-201ENST00000533887 760 ntBASIC19.42■□□□□ 0.7
CHMLP26374 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.42■□□□□ 0.7
CHMLP26374 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMLP26374 AC055717.3-201ENST00000622967 595 ntBASIC19.42■□□□□ 0.7
CHMLP26374 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMLP26374 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 REXO1L1P-202ENST00000608646 1974 ntBASIC19.42■□□□□ 0.7
CHMLP26374 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHMLP26374 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMLP26374 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHMLP26374 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMLP26374 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CHMLP26374 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHMLP26374 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHMLP26374 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMLP26374 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMLP26374 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMLP26374 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMLP26374 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CHMLP26374 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CHMLP26374 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMLP26374 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMLP26374 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMLP26374 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMLP26374 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMLP26374 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMLP26374 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.41■□□□□ 0.7
CHMLP26374 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
CHMLP26374 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.41■□□□□ 0.7
CHMLP26374 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.41■□□□□ 0.7
CHMLP26374 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHMLP26374 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms