Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LAMA1P25391 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.53■□□□□ 0.08
LAMA1P25391 AL355864.2-201ENST00000447420 863 ntBASIC15.53■□□□□ 0.08
LAMA1P25391 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.53■□□□□ 0.08
LAMA1P25391 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.53■□□□□ 0.08
LAMA1P25391 AC128714.1-201ENST00000637035 887 ntBASIC15.53■□□□□ 0.08
LAMA1P25391 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LAMA1P25391 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LAMA1P25391 AC134915.1-201ENST00000426461 574 ntBASIC15.53■□□□□ 0.08
LAMA1P25391 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.53■□□□□ 0.08
LAMA1P25391 MIR3619-201ENST00000579667 83 ntBASIC15.53■□□□□ 0.08
LAMA1P25391 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.53■□□□□ 0.08
LAMA1P25391 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LAMA1P25391 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LAMA1P25391 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LAMA1P25391 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LAMA1P25391 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
LAMA1P25391 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.52■□□□□ 0.08
LAMA1P25391 HINT2P1-201ENST00000419438 481 ntBASIC15.52■□□□□ 0.08
LAMA1P25391 AL591846.1-201ENST00000451736 433 ntBASIC15.52■□□□□ 0.08
LAMA1P25391 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.52■□□□□ 0.08
LAMA1P25391 AC025279.2-201ENST00000569730 653 ntBASIC15.52■□□□□ 0.08
LAMA1P25391 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.52■□□□□ 0.08
LAMA1P25391 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.52■□□□□ 0.08
LAMA1P25391 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LAMA1P25391 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.52■□□□□ 0.08
LAMA1P25391 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LAMA1P25391 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.52■□□□□ 0.08
LAMA1P25391 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LAMA1P25391 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LAMA1P25391 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LAMA1P25391 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.52■□□□□ 0.08
LAMA1P25391 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.52■□□□□ 0.08
LAMA1P25391 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.52■□□□□ 0.08
LAMA1P25391 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LAMA1P25391 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LAMA1P25391 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.52■□□□□ 0.08
LAMA1P25391 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.52■□□□□ 0.08
LAMA1P25391 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.52■□□□□ 0.08
LAMA1P25391 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LAMA1P25391 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.52■□□□□ 0.08
LAMA1P25391 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.52■□□□□ 0.08
LAMA1P25391 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
LAMA1P25391 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.52■□□□□ 0.07
LAMA1P25391 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.52■□□□□ 0.07
LAMA1P25391 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.52■□□□□ 0.07
LAMA1P25391 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LAMA1P25391 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LAMA1P25391 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
LAMA1P25391 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
LAMA1P25391 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LAMA1P25391 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LAMA1P25391 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
LAMA1P25391 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.52■□□□□ 0.07
LAMA1P25391 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.52■□□□□ 0.07
LAMA1P25391 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.52■□□□□ 0.07
LAMA1P25391 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LAMA1P25391 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LAMA1P25391 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.52■□□□□ 0.07
LAMA1P25391 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LAMA1P25391 NKAIN1P1-201ENST00000435754 582 ntBASIC15.52■□□□□ 0.07
LAMA1P25391 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LAMA1P25391 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.52■□□□□ 0.07
LAMA1P25391 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.52■□□□□ 0.07
LAMA1P25391 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.52■□□□□ 0.07
LAMA1P25391 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.52■□□□□ 0.07
LAMA1P25391 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
LAMA1P25391 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
LAMA1P25391 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.51■□□□□ 0.07
LAMA1P25391 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LAMA1P25391 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LAMA1P25391 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LAMA1P25391 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.51■□□□□ 0.07
LAMA1P25391 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LAMA1P25391 AC018735.1-201ENST00000437208 1502 ntBASIC15.51■□□□□ 0.07
LAMA1P25391 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LAMA1P25391 KRT8P19-201ENST00000551916 1455 ntBASIC15.51■□□□□ 0.07
LAMA1P25391 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.51■□□□□ 0.07
LAMA1P25391 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LAMA1P25391 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.51■□□□□ 0.07
LAMA1P25391 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.51■□□□□ 0.07
LAMA1P25391 MIR4741-201ENST00000579822 90 ntBASIC15.51■□□□□ 0.07
LAMA1P25391 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LAMA1P25391 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.51■□□□□ 0.07
LAMA1P25391 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.51■□□□□ 0.07
LAMA1P25391 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LAMA1P25391 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.51■□□□□ 0.07
LAMA1P25391 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms