Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NR4A1P22736 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.12■□□□□ 0.01
NR4A1P22736 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NR4A1P22736 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.11■□□□□ 0.01
NR4A1P22736 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NR4A1P22736 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NR4A1P22736 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 AC136621.1-201ENST00000624017 2304 ntBASIC15.11■□□□□ 0.01
NR4A1P22736 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NR4A1P22736 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NR4A1P22736 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
NR4A1P22736 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.11■□□□□ 0.01
NR4A1P22736 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.11■□□□□ 0.01
NR4A1P22736 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 AL020989.1-201ENST00000422979 469 ntBASIC15.11■□□□□ 0.01
NR4A1P22736 KRT18P67-201ENST00000432816 1264 ntBASIC15.11■□□□□ 0.01
NR4A1P22736 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.11■□□□□ 0.01
NR4A1P22736 RNPS1P1-201ENST00000507437 918 ntBASIC15.11■□□□□ 0.01
NR4A1P22736 AC073648.2-201ENST00000510116 352 ntBASIC15.11■□□□□ 0.01
NR4A1P22736 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.11■□□□□ 0.01
NR4A1P22736 SART3-203ENST00000546611 1184 ntBASIC15.11■□□□□ 0.01
NR4A1P22736 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.11■□□□□ 0.01
NR4A1P22736 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.11■□□□□ 0.01
NR4A1P22736 STK25P1-201ENST00000585406 838 ntBASIC15.11■□□□□ 0.01
NR4A1P22736 NKAPP1-205ENST00000585790 367 ntBASIC15.11■□□□□ 0.01
NR4A1P22736 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NR4A1P22736 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NR4A1P22736 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.11■□□□□ 0.01
NR4A1P22736 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.11■□□□□ 0.01
NR4A1P22736 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NR4A1P22736 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.11■□□□□ 0.01
NR4A1P22736 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NR4A1P22736 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NR4A1P22736 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.1■□□□□ 0.01
NR4A1P22736 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
NR4A1P22736 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.1■□□□□ 0.01
NR4A1P22736 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.1■□□□□ 0.01
NR4A1P22736 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 AC015656.1-201ENST00000624209 3578 ntBASIC15.1■□□□□ 0.01
NR4A1P22736 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.1■□□□□ 0.01
NR4A1P22736 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.1■□□□□ 0.01
NR4A1P22736 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 KLF4P1-201ENST00000412782 1185 ntBASIC15.1■□□□□ 0.01
NR4A1P22736 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.1■□□□□ 0.01
NR4A1P22736 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.1■□□□□ 0.01
NR4A1P22736 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.1■□□□□ 0.01
NR4A1P22736 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.1■□□□□ 0.01
NR4A1P22736 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 SLC25A6P4-201ENST00000586535 553 ntBASIC15.1■□□□□ 0.01
NR4A1P22736 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.1■□□□□ 0.01
NR4A1P22736 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.1■□□□□ 0.01
NR4A1P22736 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.1■□□□□ 0.01
NR4A1P22736 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NR4A1P22736 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.1■□□□□ 0.01
NR4A1P22736 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NR4A1P22736 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms