Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.62■□□□□ 0.41
RFX1P22670 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
RFX1P22670 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RFX1P22670 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.62■□□□□ 0.41
RFX1P22670 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RFX1P22670 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RFX1P22670 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RFX1P22670 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.62■□□□□ 0.41
RFX1P22670 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.62■□□□□ 0.41
RFX1P22670 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.61■□□□□ 0.41
RFX1P22670 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.61■□□□□ 0.41
RFX1P22670 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RFX1P22670 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 TFAMP1-201ENST00000412727 736 ntBASIC17.61■□□□□ 0.41
RFX1P22670 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.61■□□□□ 0.41
RFX1P22670 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RFX1P22670 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.61■□□□□ 0.41
RFX1P22670 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.61■□□□□ 0.41
RFX1P22670 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
RFX1P22670 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.61■□□□□ 0.41
RFX1P22670 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.61■□□□□ 0.41
RFX1P22670 AL390754.1-201ENST00000619088 582 ntBASIC17.61■□□□□ 0.41
RFX1P22670 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RFX1P22670 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RFX1P22670 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
RFX1P22670 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RFX1P22670 AC073439.1-201ENST00000624121 1774 ntBASIC17.61■□□□□ 0.41
RFX1P22670 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
RFX1P22670 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RFX1P22670 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RFX1P22670 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RFX1P22670 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.6■□□□□ 0.41
RFX1P22670 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX1P22670 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.6■□□□□ 0.41
RFX1P22670 AC069335.1-201ENST00000489972 472 ntBASIC17.6■□□□□ 0.41
RFX1P22670 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.6■□□□□ 0.41
RFX1P22670 IGHV3-62-201ENST00000520057 340 ntBASIC17.6■□□□□ 0.41
RFX1P22670 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.6■□□□□ 0.41
RFX1P22670 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.6■□□□□ 0.41
RFX1P22670 RN7SL204P-201ENST00000582831 262 ntBASIC17.6■□□□□ 0.41
RFX1P22670 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.6■□□□□ 0.41
RFX1P22670 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX1P22670 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 AC112504.1-201ENST00000623415 1841 ntBASIC17.6■□□□□ 0.41
RFX1P22670 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX1P22670 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX1P22670 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX1P22670 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.6■□□□□ 0.41
RFX1P22670 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFX1P22670 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RFX1P22670 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RFX1P22670 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RFX1P22670 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.59■□□□□ 0.41
RFX1P22670 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.59■□□□□ 0.41
RFX1P22670 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.59■□□□□ 0.41
RFX1P22670 AC008677.1-201ENST00000519230 1561 ntBASIC17.59■□□□□ 0.41
RFX1P22670 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.59■□□□□ 0.41
RFX1P22670 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.59■□□□□ 0.41
RFX1P22670 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFX1P22670 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.59■□□□□ 0.41
RFX1P22670 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.59■□□□□ 0.41
RFX1P22670 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RFX1P22670 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.59■□□□□ 0.41
RFX1P22670 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RFX1P22670 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms